Welcome, Guest. Please Login or Register
UGENE Bulletin Board
  Welcome to our forum.
  HomeHelpSearchLoginRegister  
 
 
Page Index Toggle Pages: 1
UGENE video tutorials #24: SITECON: Searching for TFBS and making TFBS alignments profiles (Read 5572 times)
Jun 29th, 2010 at 7:40pm

Alexey Filippenko   Offline
YaBB Newbies
Novosibirsk

Gender: male
Posts: 39
*
 
UGENE SITECON plugin is a program package for searching for potential transcription factor binding sites. The tool is developed in Institute of Cytology and Genetics SB RAS.

The video shows how to use SITECON to search for TFBS in a DNA sequence and how to create SITECON profiles for future searches.


http://www.youtube.com/watch?v=243r5P_JhH4
« Last Edit: Jun 30th, 2010 at 5:23pm by Alexey Filippenko »  
IP Logged
 
Reply #1 - May 9th, 2011 at 5:54pm

Poh   Offline
YaBB Newbies

Posts: 46
*
 
Can I put or select more than one profiles to search in 1 go?
 
IP Logged
 
Reply #2 - May 17th, 2011 at 8:25pm

Mikhail Fursov   Offline
YaBB Administrator

Gender: male
Posts: 162
*****
 
Poh wrote on May 9th, 2011 at 5:54pm:
Can I put or select more than one profiles to search in 1 go?


With workflow designer: yes. With sequence view dialog - no.
Please add issue to the tracker if solution in sequence view is also actual.
 

---
UGENE team
IP Logged
 
Page Index Toggle Pages: 1