Start-Start Constraint Element
Add the Start-Start constraint to two algorithm elements. Let’s denote these elements as alg1 and alg2.
Parameters in GUI
| Parameter | Description | Default Value |
|---|---|---|
| Min distance | Minimum distance between an alg1 annotation start and an alg2 annotation start. | 0bp |
| Max distance | Maximum distance between an alg1 annotation start and an alg2 annotation start. | 0bp |
Constraint Explanation:
Let:
- alg1_annot_start := the first nucleotide of an annotation obtained from alg1.
- alg2_annot_start := the first nucleotide of an annotation obtained from alg2.
The resulting annotations should comply with the rule:
Min distance <= Distance(alg1_annot_start, alg2_annot_start) <= Max distance
Parameters in Schema File
Type: distance
Distance-type: start-to-start
| Parameter | Parameter in the GUI | Type |
|---|---|---|
| min | Min distance | numeric |
| max | Max distance | numeric |