Gene-by-gene Approach Report

Outputs a table of genes found in a reference sequence.

Element type: genebygene-report-id

Parameters

ParameterDescriptionDefault valueParameter in Workflow FileType
Output filePath to store the final report.output-filestring
Annotation nameName of the annotation used to compare genes with reference genomes.blast-resultannotation_namestring
Existing fileHow to handle an existing output file: Merge, Overwrite, or Rename.Mergeexistingstring
Identity cutoffRequired identity between gene sequence length and annotation length (percent). BLAST identity is checked afterward.90.0000%identitynumeric

Input/Output Ports

Input Port

Name in GUIName in Workflow FileSlot in GUISlot in Workflow FileType
Gene by gene report datain-dataInput annotationsgene-annann-table-list
Input sequencesgene-seqseq
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