Convert bedGraph Files to bigWig Element
Convert bedGraph files to bigWig.
Element type: bgtbw-bam
Parameters
| Parameter | Description | Default value | Parameter in Workflow File | Type |
|---|---|---|---|---|
| Output directory | Select an output directory. Options: Custom – use ‘Custom directory’ parameter Workflow – internal directory Input file – directory of the input file | Input file | out-mode | numeric |
| Custom directory | Specify the output directory path. | custom-dir | string | |
| Genome | File with genome length. | human.hg18 | genome | string |
| Output name | Output filename. If left empty, the first input file name is used with an additional extension. | out-name | string | |
| Block size | Number of items to bundle in R-tree. | 256 | bs | numeric |
| Items per slot | Data points bundled at the lowest level. | 1024 | its | numeric |
| Uncompressed | If true, do not use compression. | False | unc | boolean |
Input/Output Ports
| Port Name (GUI) | Workflow File Name | Slots |
|---|---|---|
| BedGraph files | in-file | Source URL → url (string) |
| BigWig files | out-file | Source URL → url (string) |