Read NGS Reads Assembly Element
Input one or several files with assembled NGS reads in SAM, BAM, or UGENEDB format.
The element outputs message(s) with the assembled reads data.
See the list of all available formats here.
Element type: read-assembly
Parameters
| Parameter | Description | Default value | Parameter in Workflow File | Type |
|---|---|---|---|---|
| Input file(s) | Input files | Dataset 1 | url-in | string |
Input/Output Ports
The element has 1 output port:
| Name in GUI | Name in Workflow File | Type |
|---|---|---|
| Assembly | out-assembly | |
| Slots: | ||
| Slot In GUI | Slot in Workflow File | Type |
| Assembly data | assembly | assembly |
| Dataset name | dataset | string |
| Source URL | out-url | string |