Convert SnpEff Variations to Annotations Element
Parses information added to variations by SnpEff into standard annotations.
Element type: convert-snpeff-variations-to-annotations
Parameters
| Parameter | Description | Default value | Parameter in Workflow File | Type |
|---|---|---|---|---|
| Output file | Location of the output data file. If set, overrides the “Location” slot of the output port. | url-out | string | |
| Document format | Format of the output file. | genbank | document-format | string |
Input/Output Ports
| Port Name (GUI) | Workflow File Name | Slots |
|---|---|---|
| Input file URL | in-variations-url | Source URL → url (string) |