NGS

• ChIP-Seq Coverage
• ChIP-seq Analysis with Cistrome Tools
• Extract Consensus from Assembly
• Extract Coverage from Assembly
• Extract Transcript Sequences
• Quality Control by FastQC
• De novo Assemble Illumina PE Reads
• De novo Assembly of Illumina PE and Nanopore Reads
• De novo Assemble Illumina SE Reads
• De Novo Assembly and Contigs Classification
• Parallel NGS Reads Classification
• Serial NGS Reads Classification
• RNA-Seq Analysis with TopHat and StringTie
• RNA-seq Analysis with Tuxedo Tools
• Variation Annotation with SnpEff
• Call Variants with SAMtools
• Variant Calling and Effect Prediction
• Raw ChIP-Seq Data Processing
• Raw DNA-Seq Data Processing
• Raw RNA-Seq Data Processing
• Get Unmapped Reads