Filter out Short Sequences
This workflow filters out sequences shorter than a specified minimum length. The resulting sequences are written to a FASTA file by default.
How to Use This Sample
If you haven’t used workflow samples in UGENE before, see the “How to Use Sample Workflows” section of the documentation.
Workflow Sample Location
The workflow sample “Filter out Short Sequences” is available in the Scenarios section of the Workflow Designer samples.
Workflow Image
The opened workflow looks as follows:
Workflow Wizard
The wizard consists of 3 pages:
1. Input sequence(s)
On this page, input sequence files must be selected.
2. Filtering
On this page, filtering parameters can be modified.
Parameters
| Parameter | Description | Default Value | Parameter in Workflow File | Type |
|---|---|---|---|---|
| Minimum length | Minimum sequence length | (user-defined) | (not specified) | numeric |
3. Output data
On this page, the output file location can be configured.
