Skip to end of metadata
Go to start of metadata

Analyzes a nucleotide sequence with a UGENE Query Language (UQL) workflow. The workflow specifies a set of features to search for and their positional relationship.

To learn more about UQL workflows read UGENE Query Designer Manual.

Parameters in GUI

 

ParameterDescriptionDefault value
Workflow (required)UQL workflow file. 
MergeMerges regions of each result into a single annotation.False
OffsetIf the Merge parameter is set to True, adds left and right offsets of the specified length to the annotation.0
Parameters in Workflow File
Type: query
ParameterParameter in the GUIType
schemaWorkflowstring
mergeMergeboolean
offsetOffsetnumeric

Input/Output Ports

The element has 1 input port:

Name in GUI: Input sequences

Name in Workflow File: in-sequence

Slots:

Slot In GUISlot in Workflow FileType
Sequencesequencesequence

And 1 output port:

Name in GUI: Result annotations

Name in Workflow File: out-annotations

Slots:

Slot In GUISlot in Workflow FileType
Set of annotationsannotationsannotation-table
  • No labels