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Extract the consensus sequence from the incoming assembly.

Parameters in GUI

ParameterDescriptionDefault value
AlgorithmThe algorithm of consensus extracting.Default
Keep gapsSet this parameter if the result consensus must keep the gaps.True

Parameters in Workflow File

Type: extract-consensus
ParameterParameter in the GUIType
algorithmAlgorithmstring
keep-gapsKeep gapsboolean

Input/Output Ports

The element has 1 input port:

Name in GUI: in-assembly

Name in Workflow File: in-assembly

Slots:

 

Slot In GUI

Slot in Workflow File

Type

Assembly data

assembly

assembly

And 1 outut port:

Name in GUI: out-sequence

Name in Workflow File: out-sequence

Slots:

 

Slot In GUISlot in Workflow FileType
Sequencesequencestring
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