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Extract the coverage and bases count from the incoming assembly.

 Parameters in GUI

Output fileLocation of output data file. If this attribute is set, slot "Location" in port will not be used.assembly_coverage.txt
ExportData type to export.coverage
TresholdThe minimum coverage value to export.1
Parameter
Description
Default value

Parameters in Workflow File

Type: extract-assembly-coverage
url-outOutput filestring
export-typeExportstring
thresholdTresholdnumeric
Parameter
Parameter in the GUI
Type

Input/Output Ports

The element has 1 input port:

Name in GUI: in-assembly

Name in Workflow File: in-assembly

Slots:

 

Assembly data

assembly

assembly

Slot In GUI

Slot in Workflow File

Type

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