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The element summarizes gene abundance output of StringTie and saves the result into a common tab-delimited text file. The first two columns of the file are "Gene ID" and "Gene name". Each other column contains "FPKM" values for the genes from an input gene abundance file.

Parameters in GUIElement type: stringtie-gene-abundance-report


ParameterDescriptionDefault valueParameter in Workflow FileType
Output file

Specify the name of the output tab-delimited text file.

 ParameterParameter in the GUIType

Parameters in Workflow File

Type: stringtie-gene-abundance-report

Output file

Input/Output Ports

The element has 1 input port:

Name in GUI: Input StringTie gene abundance file(s) url

Name in Workflow File: in


Slot in GUISlot in Workflow FileType
Input URLurlstring