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Extract the consensus sequence from the incoming multiple sequence alignment.

Parameters in GUI

ParameterDescriptionDefault value
AlgorithmThe algorithm of consensus extracting. 
ThresholdThe threshold of the algorithm.100
Keep gapsSet this parameter if the result consensus must keep the gaps.True

Parameters in Workflow File

Type: extract-msa-consensus-sequence

ParameterParameter in the GUIType
keep-gapsKeep gapsboolean

Input/Output Ports

The element has 1 input port:

Name in GUI: in-msa

Name in Workflow File: in-msa


Slot In GUISlot in Workflow FileType

And 1 output port:

Name in GUI: out-sequence

Name in Workflow File: out-sequence


Slot In GUISlot in Workflow FileType
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