Download UGENE and components

The current stable version is 41.0 (December, 2021). See release notes.

UGENE Packages

Complete UGENE packages with external tools included.

Reference Data for NGS

To run some NGS data analysis (taxonomy classification or ChIP-Seq) it is required to provide reference data (e.g. RefSeq databases, NCBI taxonomy files, etc.).
It is recommended to use the Online Installer to download these data, however, one can also use the download links below and manually configure the packages. Make sure there is enough disk space on the target computer.

Data for NGS metagenomics classification

Data for ChIP-Seq analysis

Source code

UGENE is an open-source software with GNU GPL v2 license. The source code is available on GitHub.

Old UGENE Packages

Before UGENE version 34 the following packages were provided:
  • Full Package: UGENE main executables, external tools (including tools for NGS data analysis).
  • NGS Package: the same as in the Full Package + ChIP-Seq data analysis additions (RScript, reference data)
Since version 34 only one online and one offline package per 64-bit operating system was left (see above).
The old packages of UGENE version 33 are available below. There are also earlier packages for obsolete versions of the operating systems.

Windows

Besides types specified above, the following package delivery options were available in UGENE v.33 (note that the delivery type does not affect a package content):
  • Offline installer: provides more close integration with Windows
  • Zip archive: a portable version, does not require administrative rights
OS/Platform + Delivery Type Full Package NGS Package
Windows 7+ (64-bit)
Offline installer
Download v.33 N/A
Windows 7+ (64-bit)
Zip archive
Download v.33 Download v.33
Windows 7+ (32-bit)
Offline installer
Download v.33 N/A
Windows 7+ (32-bit)
Zip archive
Download v.33 N/A
Windows XP/Vista (32-bit)
Zip archive
Download v.1.29 N/A

Linux

UGENE delivery type universal for different Linux versions is a TAR.GZ archive.
OS/Platform + Delivery Type Full Package NGS Package
Linux (64-bit)
TAR.GZ archive
Download v.33 Download v.33
Linux (32-bit)
TAR.GZ archive
Download v.33 N/A

macOS

UGENE bundle type on macOS is a DMG installer.
OS/Platform + Delivery Type Full Package NGS Package
macOS 10.7+ (64-bit)
DMG installer
Download v.33 Download v.33
Mac OS X 10.6 (64-bit)
DMG installer
Download v.1.18.0 N/A
Mac OS X 10.5 (32-bit)
DMG installer
Download v.1.18.0 N/A
Mac OS X 10.4 (Intel)
DMG installer
Download v.1.10.3 N/A
Power Macintosh (PowerPC)
DMG installer
Download v.1.10.3 N/A

External Tools Packages for UGENE v.33